After subscribing to the AMI you can create a cluster specifying the GPU instance type you’d like to use for the nodes. For example:
eksctl create cluster --node-type=p2.xlarge
The AMI resolvers (both static and auto) will see that you want to use a GPU instance type (p2 or p3 only) and they will select the correct AMI.
Once the cluster is created you will need to install the NVIDIA Kubernetes device plugin. Check the repo for the most up to date instructions but you should be able to run this:
kubectl create -f https://raw.githubusercontent.com/NVIDIA/k8s-device-plugin/v1.11/nvidia-device-plugin.yml
addonsupport has been added as part of 0.2.0 it is envisioned that there will be a addon to install the NVIDIA Kubernetes Device Plugin. This addon could potentially be installed automatically as we know an GPU instance type is being used.